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Image analysis

Image analysis in your browser, no install or macros

Looking for an ImageJ or Fiji alternative that runs in the browser? Conspecta brings AI-assisted measurement to your microscopy images and keeps the results connected to your samples and figures.

Honest comparison

Conspecta vs. ImageJ / Fiji

ImageJ and Fiji are free, open-source, and everywhere in biology. Here is where a connected, browser-based platform fits differently.

How Conspecta compares to ImageJ / Fiji
CapabilityConspectaImageJ / Fiji
SetupNo install; runs in any browser on desktop, tablet, or phoneDesktop install (Java); plugins configured per machine
Counting & detectionAI counts cells, nuclei, colonies, and particlesManual thresholding or plugins; macros for batch runs
MeasurementCoverage, intensity, marker classification, and colocalizationFull measurement suite via menus and macros
Custom modelsLabel a few examples, train a detector, no codeRequires ML plugins or scripting
File formatsLIF, TIFF, PNG, and JPEG open directlyTIFF/PNG native; LIF via the Bio-Formats plugin
Where results liveLinked to samples, figures, and your notebookExported to CSV; context lives in other tools
CollaborationShared team workspace, access anywhereSingle-user desktop; share files manually
ExtensibilityCurated AI analysis toolsThousands of community plugins, fully scriptable

When ImageJ or Fiji is still the right choice

ImageJ and Fiji are free, open-source, and endlessly extensible if you are comfortable writing macros and wiring up plugins. That power assumes you want to script your analysis. Conspecta is for the biologists who would rather point and click, with AI analysis that stays connected to their samples, figures, and notebook, and nothing to install.

Why teams switch

What you get with Conspecta

AI object counting

Count cells, nuclei, colonies, or particles with pre-trained models. No thresholding, no macros, point and click.

Train custom detectors

Draw a few examples and train a model that finds your objects in bulk, the ones generic detection misses. No code or plugins.

A full measurement suite

Percent area coverage, marker intensity (mean, median, integrated density), marker-positive fraction, and colocalization, in one workspace.

Multi-channel & z-stack viewer

Open LIF, TIFF, PNG, and JPEG in the browser. Step through channels, z-planes, and time series without a desktop app.

Results that stay connected

Every measurement links to its sample and flows into figures and your notebook, with no copy-paste between tools.

Built for teams

Share results and protocols so everyone works from the same data, not files scattered across laptops.

More image analysis comparisons:Conspecta vs. CellProfilerConspecta vs. Imaris

Try image analysis in your browser

Upload your first image and run a detection in minutes. Free for individuals.